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Table des matières
CPMD on Jean Zay
Introduction
CPMD is an ab-initio molecular dynamics software using the density functional theory and plane wave bases.
Useful links
Available versions
Version | Modules to load |
---|---|
4.3 MPI, CUDA | cpmd/4.3-mpi-cuda |
Example of usage on the CPU partition
Usage on only 1 compute node
#!/bin/bash #SBATCH --nodes=1 # 1 node reserved #SBATCH --ntasks-per-node=40 # 40 MPI tasks #SBATCH --cpus-per-task=1 # 1 OpenMP thread #SBATCH --hint=nomultithread # Disable hyperthreading #SBATCH --job-name=cpmd #SBATCH --output=%x.o%j # Output file %x is the jobname, %j the jobid #SBATCH --error=%x.o%j # Error file #SBATCH --time=10:00:00 # Expected job duration HH:MM:SS (max 100h) ## Please, refer to comments below for ## more information about these 4 last options. ##SBATCH --account=<account>@cpu # To specify cpu accounting: <account> = echo $IDRPROJ ##SBATCH --partition=<partition> # To specify partition (see IDRIS web site for more info) ##SBATCH --qos=qos_cpu-dev # Uncomment for job requiring less than 2 hours ##SBATCH --qos=qos_cpu-t4 # Uncomment for job requiring more than 20h (up to 4 nodes) # Clean out modules loaded in interactive and inherited by default module purge # Load the necessary modules module load cpmd/4.3-mpi-cuda srun cpmd.x cpmd.in
Example of usage on the GPU partition
The GPU version has not yet been tested.